3DBIONOTES is a web tool for the bio(medical/chemical) annotation of protein structures
CNB-CSIC
Joined March 2018
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3DBIONOTES retweeted
3rd session of #ELIXIR Application Track starts at 11.30 and will present ELIXIR #omic resources. With talks presenting prediction of RNA stucture (cdPredictor), #FAIR human protein resource (@neXtProt_news), and annotation tool for protein structures
(@3DBIONOTES) #ECCB18
@3DBIONOTES at the @eccb18 and its nice speaker 😄
@INB_Official @ELIXIREurope @CNB_CSIC @JM_Carazo – at Attiki, Greece
@3DBIONOTES hopes you had enjoyed the summer! We are back annotating the new structure releases and, in this example, mapping different cancer diseases on a human spliceosome complex.
@CNB_CSIC @INB_ElixirES @ELIXIREurope @rcsbPDB @PDBeurope @EMDB_EMPIAR @uniprot @JM_Carazo
@3DBOINOTES wishes of you a very nice summer time displaying post-translational modifications on the Human Step I Spliceosome complex
@CNB_CSIC @INB_ElixirES @ELIXIREurope @PDBeurope @rcsbPDB @uniprot @EMDB_EMPIAR @JM_Carazo
#protein_complex #protein_annotations #structure
When a new structure is released in @EMDB_EMPIAR a new structure is annotated in @3DBIONOTES Always up to date!
Acetylation sites in the E. Coli Polymerase Elongation Complex
@CNB_CSIC @INB_ElixirES @ELIXIREurope @PDBeurope @rcsbPDB @uniprot @JM_Carazo
@3DBIONOTES mapping brain cancer mutations on the human PTCH1 and SHHN complex interface.
@CNB_CSIC @INB_ElixirES @INB_ElixirES @PDBeurope @EMDB_EMPIAR @rcsbPDB @uniprot @JM_Carazo
#protein_structure #protein_complex #protein_annotations #cryoEM
@3DBIONOTES wishes you a nice weekend displaying how annotations can be displayed at gene level. In this example glycosylation sites on the human PKD2 F604P mutant.
@CNB_CSIC @INB_ElixirES @ELIXIREurope @EMDB_EMPIAR @rcsbPDB @PDBeurope @uniprot @ensembl @JM_Carazo
New structure released in EMDB, new structure annotated! @3DBIONOTES highlighting short linear motives binding sites in the RNA POLYMERASE SIGMA54
@CNB_CSIC @INB_ElixirES @ELIXIREurope @EMDB_EMPIAR @PDBeurope @rcsbPDB @uniprot @JM_Carazo
#protein_complex #structure #annotations
@3DBIONOTES taking the opportunity to display posttranlational modifications on the KINESIN-5 MOTOR DOMAIN complex and wishing you nice weekend!
@CNB_CSIC @INB_ElixirES @ELIXIREurope @rcsbPDB @PDBeurope @EMDB_EMPIAR @uniprot @JM_Carazo
#protein #complex #structure #annotations
@3DBIONOTES always ready to annotate last released structures, here displaying metal binding sites on the recently published "Surveillance Complex".
@CNB_CSIC @INB_ElixirES @ELIXIREurope @EMDB_EMPIAR @PDBeurope @rcsbPDB @uniprot @JM_Carazo
#protein #structure #annotations #EM
3DBIONOTES displaying genomic variants associated with different types of cancer in the Serotonine 5HT1B Receptor alpha/beta interface
@CNB_CSIC @INB_ElixirES @ELIXIREurope @EMDB_EMPIAR @PDBeurope @rcsbPDB @uniprot @JM_Carazo
#protein #structure #cancer
3DBIONOTES always up to date! Visualization of some torsion angle outliers (by MolProbity) on the recently released Filament of Acetyl-CoA Carboxylase
@CNB_CSIC @INB_ElixirES @ELIXIREurope @EMDB_EMPIAR @PDBeurope @rcsbPDB @JM_Carazo #protein #complex #structure #annotations #EM
Displaying cancer mutations on the human pre40S ribosomal structure
@3DBIONOTES @CNB_CSIC @INB_ElixirES @ELIXIREurope @EMDB_EMPIAR @uniprot @rcsbPDB @PDBeurope @JM_Carazo
#protein #structre #complex #cancer #cryoEM #ribosome
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