Head Research Engineer @SWC_Neuro/@GatsbyUCL. Open source developer, lead @swc_niu & @brain_globe. Runner, cyclist, sandwich enthusiast.
London
Joined July 2011
- Tweets677
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- Followers655
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Pinned Tweet
If you’re leaving @X,
I’m also on:
Mastodon at mastodon.online/@adamltyson
Bluesky at bsky.app/profile/adamltyson.…
Adam Tyson retweeted
📢 Apply now for the 7-week #Mathematics #SummerSchool in London! You will develop mathematics skills and intuition necessary to enter the #TheoreticalNeuroscience or #MachineLearning field.
ℹ️ ucl.ac.uk/gatsby/study-and-w…
Please help spread the word!
ALT Gatsby Bridging Programme (23 Jun - 8 Aug) Application deadline: 7 Feb 2025, see www.ucl.ac.uk/gatsby/study-and-work/gatsby-bridging-programme
Adam Tyson retweeted
Movement now has a blog! We discuss the new version (v0.0.21), plans for the future and announce our new community calls.
For more details see: movement.neuroinformatics.de…
Adam Tyson retweeted
BrainGlobe has a new atlas, the prairie vole!
For more details see the blog: brainglobe.info/blog/prairie…
Original paper: doi.org/10.7554/eLife.87029.…
Adam Tyson retweeted
.@brain_globe is improving the way neuroscientists analyse and visualise neuroimaging data 🐟🦀🧠
Find out more about their work, and their recent recognition from @UCLopenscience, in our latest blog: sainsburywellcome.org/web/bl…
#OpenSource #Neuroscience
ALT Dorsal view of the cavefish brain atlas
Adam Tyson retweeted
The 2024 UCL Neuropixels course will take place on 14-16 October. Registration is free. Register today! More info: ucl.ac.uk/neuropixels/traini…
Adam Tyson retweeted
BrainGlobe has a new atlas, the Axolotl (Ambystoma mexicanum)!
For more details see the blog: brainglobe.info/blog/axolotl…
Original paper: doi.org/10.1038/s41598-021-8…
ALT Saggital view of the axotlotl atlas annotations.
One more week to apply for this job. Happy to answer any questions via DM.
Come work at @SWC_Neuro with us (@swc_niu) and scientific computing to help us manage and share lots and lots of cool neuroscience data.
Adam Tyson retweeted
Interested on detecting and then visualizing cells in a full brain? 🧠 Don't miss our tutorial on how to do it using @brain_globe & BiaPy! Open source initiatives together are stronger 💪
Nice tutorial on how to combine BrainGlobe and @BiaPyX to detect cells in whole brain microscopy images.
We're always interested in ways to make our software interoperable with other tools.
biapy.readthedocs.io/en/late…
Adam Tyson retweeted
Come work at @SWC_Neuro with us (@swc_niu) and scientific computing to help us manage and share lots and lots of cool neuroscience data.
We’re hiring!
Join us as a Senior Research Data Steward. You’ll provide technically focused support and consultancy to researchers and promote Open Science and FAIR data principles.
Learn more and apply:
sainsburywellcome.org/web/co…
Adam Tyson retweeted
Nice tutorial on how to combine BrainGlobe and @BiaPyX to detect cells in whole brain microscopy images.
We're always interested in ways to make our software interoperable with other tools.
biapy.readthedocs.io/en/late…
Adam Tyson retweeted
We've just released the "brainmapper" widget allowing analysis of cellular distributions in whole-brain microscopy images entirely within @napari_imaging.
Full details available on the blog: brainglobe.info/blog/brainma…
ALT A screenshot of the brainmapper widget, showing the distribution of napari points within a BrainGlobe atlas.
Adam Tyson retweeted
BrainGlobe now includes an atlas with barrel column annotations from Bolaños-Puchet & @TeskaAleksandra et al.
Full details on the blog: brainglobe.info/blog/barrel-…
Thanks to @axlbsi for bringing this to BrainGlobe!
Original paper: doi.org/10.1162/imag_a_00209
ALT Visualisation of some barrel columns using brainrender
Adam Tyson retweeted
We’re hiring!
Join us as a Senior Research Data Steward. You’ll provide technically focused support and consultancy to researchers and promote Open Science and FAIR data principles.
Learn more and apply:
sainsburywellcome.org/web/co…
Come work at @SWC_Neuro with us (@swc_niu) and scientific computing to help us manage and share lots and lots of cool neuroscience data.
We’re hiring!
Join us as a Senior Research Data Steward. You’ll provide technically focused support and consultancy to researchers and promote Open Science and FAIR data principles.
Learn more and apply:
sainsburywellcome.org/web/co…
Adam Tyson retweeted
Please join the @INCForg + @CNSorg Software Working group on 9th July for our next meeting.
Adam Tyson from the Sainsbury Wellcome Centre will talk about the #software tools their group develops for #SystemsNeuroscience:
ocns.github.io/SoftwareWG/20…
#Neuroscience
Adam Tyson retweeted
We've added a new atlas, @KozolRobert's brain atlas of the blind Mexican cavefish, Astyanax mexicanus.
More details on the blog:
brainglobe.info/blog/cavefis…
ALT Dorsal view of the cavefish brain atlas annotations.
Nice piece about our team (@swc_niu) at @SWC_Neuro & @GatsbyUCL.
We’re building open source software tools for neuroscience and machine learning.
Find out more at our website (neuroinformatics.dev) and GitHub (github.com/neuroinformatics-…).
Meet our Neuroinformatics Unit! Driven by an open science ethos, the team of research software engineers work closely with SWC and @GatsbyUCL researchers to build tools that improve data organisation, refine analysis pipelines, and more: sainsburywellcome.org/web/bl… @swc_niu
ALT The Neuroinformatics Unit in Spring 2024, clockwise from the top left: Sofia Miñano-Gonzalez, Igor Tatarnikov, Adam Tyson, Joe Ziminski, Viktor Plattner, Alessandro Felder, Chang Huan Lo, Niko Sirmpilatze, Laura Porta
Adam Tyson retweeted
Meet our Neuroinformatics Unit! Driven by an open science ethos, the team of research software engineers work closely with SWC and @GatsbyUCL researchers to build tools that improve data organisation, refine analysis pipelines, and more: sainsburywellcome.org/web/bl… @swc_niu
ALT The Neuroinformatics Unit in Spring 2024, clockwise from the top left: Sofia Miñano-Gonzalez, Igor Tatarnikov, Adam Tyson, Joe Ziminski, Viktor Plattner, Alessandro Felder, Chang Huan Lo, Niko Sirmpilatze, Laura Porta
Adam Tyson retweeted
Hey @talmop and @TrackingActions ! If you haven’t heard about this neat package called movement, you should! It seems pretty cool!
github.com/neuroinformatics-…
It’s from Niko Sirmpilatze (I think he’s only on mastodon) and the @swc_niu. Looks pretty sweet!
