Scientist. Educator. Biotech. Crop Improvement. Developmental Biology. Gene Editing. Colorado State Biology @csubiology

Fort Collins, CO
Joined September 2008
Come join us!
🌿We’re hiring! CSU Biology is seeking applications for a tenure-track Assistant Professor in Genotypes to Phenotypes, with a focus on genomics, quantitative genetics, computational biology, and systems biology. Deadline: Nov 15, 2026 | 11:59PM MST Apply: col.st/59g5z
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Devin O'Connor retweeted
Seed number per pod is a difficult trait to move in soybean. Stacey and colleagues found a mutant that takes four-seeded pods from about 3% to nearly 30%, and CRISPR knockouts of GmNAT1 and GmULT genes raise four-seeded pods without hurting seed weight or pod number. Cool work! doi.org/10.64898/2026.10.09.…
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Devin O'Connor retweeted
Check out our new review @ThePlantCell A collaborative effort with Yangnan Gu and Shou-Ling Xu, and members of our labs, bringing together practical lessons for designing, executing, and interpreting proximity-labeling proteomics in plants: academic.oup.com/plcell/arti…
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Devin O'Connor retweeted
Bypassing Tissue Culture in Wheat Base Editing! 🌾⚡ Barley Stripe Mosaic Virus (BSMV-BE) Delivers Heritable Base Edits in Hexaploid Wheat! Researchers engineer BSMV to deliver sgRNAs into stable CBE/ABE-expressing wheat lines, unlocking tissue-culture-free, heritable base editing! 🎯🧬 Key Breakthrough Highlights: 📦 BSMV-BE Vector Engineering: Inserted sgRNAs downstream of the γb stop codon in BSMV RNAγ, confirming compatibility with both CBE (hA3A-nCas9-UGI) and ABE (ABE8e-nCas9). 🍃 High Somatic Efficiency: Mechanical sap inoculation achieved up to 87.7% somatic CBE editing (TaMTL) and 40.0% ABE editing (TaALS-G631) in hexaploid wheat. 🌾 Virus-Free Heritable Transmission: M1 offspring transmitted edits without viral persistence, achieving heritable efficiencies of 30.2% (TaMTL) and 28.8% (TaGASR7). 🛡️ Herbicide Resistance Trait: Target editing at TaALS-P174 produced M2 wheat plants with robust resistance to nicosulfuron herbicide! A game-changing framework for monocot functional genomics and precision crop breeding! 🚀🌟 doi.org/10.1016/j.xplc.2026.… #WheatGenomics #BaseEditing #BSMV #CRISPR #CropEngineering #AgBiotech
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Devin O'Connor retweeted
Bypassing CRISPR Patent Restrictions in Crops! 🌿⚡ Cuong X. Nguyen’s Team at VAST Deploys AI-Designed OpenCRISPR-1 in Dicot Plants on bioRxiv! Published on bioRxiv (Aug 28, 2026): Open-source AI nuclease delivers SpCas9-equivalent editing yields in soybean and tobacco without commercial IP bottlenecks! 🎯🌱 Key Engineering Benchmarks: 🛠️ Plant-Optimized OpenCRISPR-1 Vector (pBSE-OpenCRISPR-1): Engineered with dual NLS signals (3xFLAG-NLS N-term, NLS C-term) under the soybean GmUBQ promoter and AtU6-26 sgRNA driver targeting standard 5’-NGG-3’PAMs. 🫘 49.55% Soybean Hairy Root Edit Rate: Targeted fatty acid desaturase GmFAD2-1B, achieving a 49.55% total mutation rate via Oxford Nanopore sequencing. 🚬 75% T0 Editing Yield in Tobacco: Leaf disc transformation targeting NbPDSa/b yielded editing in 27/36 T0 plants, with 13.8% achieving complete homozygous/biallelic knockout (Line 26 fully albino). ✂️ Classic Cas9 Cleavage Pattern: Cleavage mapped precisely 2–3 nt upstream of NGG PAM, proving AI-generated nucleases perform identically to natural Cas9 enzymes in plant cells. Democratizing precision gene editing for global crop improvement! 🚀🌟 doi.org/10.64898/2026.08.27.… #OpenCRISPR #PlantGenomics #SoybeanEditing #CRISPR #bioRxiv2026 #AgBiotech
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Three open-rank faculty positions in crop design and synthetic biology at UGA. AI and computational crop design, genome engineering, and integrative crop design. Review of applicants begins October 15. ugajobsearch.com/postings/49…
🤖 Made with AI
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Welcome our new postdoc Dr. Gabby Rupp! Can't wait for her contributions! oconnorlab.colostate.edu/wel… linkedin.com/in/gabrielle-ru…
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Online now: Self-organization of vascular strands drives their patterning in the Arabidopsis shoot apex dlvr.it/TPCWxP
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Hiring a #postdoc to join our new lab at CSU! oconnorlab.colostate.edu
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Devin O'Connor retweeted
Now online: A tandem of two papers showing TMK regulation of PIN-dependent auxin transport cell.com/cell/fulltext/S0092… (PIN2, Friml lab) and cell.com/developmental-cell/… (PIN1, Xu lab)
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Paradoxes lingering around our lab ever since we started working on CLE peptide signaling finally resolved, genetically 🫛🫛🫛🥕: One type of CLE signaling must be dialed down so that another type can drive root phloem initiation and differentiation! ⚖️ nature.com/articles/s41477-0…
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‼️ New Date for the 2025 FASEB SRC "Mechanisms of Plant Development". 📅August 24th - 29th 2025 📍Southbridge (MA) 🇺🇸 New! Contribute the image of the conference poster 😎🌿🌱 ❓Details and signup for updates ➡️mailchi.mp/1f0412e00ebe/v8hz…… Plz retweet! 🙏🏼
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The requisite “we are getting a new awesome instrument” post! Leica Stellaris 5 going in. Thanks to @csubiology and @CSUNaturalSci for this great resource, and to the CSU MAOI! moai.colostate.edu/
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It’s great to be back at @slcuplants to visit old friends, old seeds, and old buildings, but also to share some new data from @PairwisePL ! Let’s edit development!
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Discovered miR396 as a barrier to shoot regeneration in tomato crops. Suppressing miR396 boosts regeneration rates, facilitating gene-editing in low-efficiency genotypes. #CropGeneticEngineering @OxfordJournals Details:doi.org/10.1093/hr/uhad291
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Devin O'Connor retweeted
#LatestIssue cover: Vascular patterning phenotype of young barley roots with altered PIN activity. Radial cross sections were obtained by vibratome sectioning, cleared using the ClearSee method, and stained. Courtesy of Riccardo Fusi. 📖 See Fusi et al.: doi.org/10.1111/nph.19777
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Favorite genes wait in line!
Our new pre-print comes with a shiny app, the Tissue-level Resolution EXpression viewer for leaf scRNA-seq data, TREX.leaf -> Try it out to check your favorite gene! The app: psb.ugent.be/shiny/trex.leaf… The manuscript: biorxiv.org/content/10.1101/…
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