Phenomizer (@phenomizer) profile picture

Differential diagnostic tool for human genetics based on semantic similarity computed with the HPO

Berlin, Germany
Joined June 2015
Stephen Kingsmore giving a shoutout to @phenomizer . 🥳
Phenomizer is still going strong 13 years later! see: molecularcasestudies.cshlp.o…
1
2
5
Replying to @phenomizer
@phenomizer is back!!!🎉 Thank you, from a genetics residency program director who loves using this as a teaching resource! (And using it myself to help craft a differential when seeing patients!) compbio.charite.de/phenomize… – at Birmingham, AL
1
2
Phenomizer is now working again! @phenomizer @hp_ontology
Thanks to Marten the server is up again, but some component of @phenomizer is not configured correctly. We‘re on it… @hp_ontology
1
2
1
19
Replying to @phenomizer
We miss you, @phenomizer
1
2
Thanks to Marten the server is up again, but some component of @phenomizer is not configured correctly. We‘re on it… @hp_ontology
1
2
1
10
I am so sorry about this. There is not much I can do at the moment. You might try to find the right people at charite that decided this. (Or maybe find a sponsor 🤗)
HPO release for June 2021 is out. Almost 200 new terms and lots of improvements. Get it here hpo.jax.org/app/ and see the announcement here: groups.io/g/human-phenotype-… #openstandards #Ontology #OpenScience #DigitalHealth
1
1
Cool. @hp_ontology used as well in this rare disease project in 🇸🇪. Probably also @phenomizer (which is integrated in the software ‚scout‘)
Over 1,200 with rare diseases received a diagnosis thanks to the integration of large-scale genomics into Stockholm's healthcare system, constituting a major leap forward in the emerging field of #precisionmedicine. Results out in @GenomeMedicine. bit.ly/3qWQIFv
2
2
10
February 2021 release of @hp_ontology now out. 279 new terms. Please read this: groups.io/g/human-phenotype-… . Some URLs won’t work soon. Always use PURLs. @MonarchInit #openstandards #freestandards #digitalhealth
7
14
Please check out the latest article on the evolution of @hp_ontology as we near 2021. Thanks to @pnrobins @drseb_ for letting me pitch in over the last few years, specifically on the approach to drug metabolism phenotypes. @emedgene
Our latest article now available at NAR: academic.oup.com/nar/advance…
3
5
We are happy to announce the December 2021 release of @hp_ontology . More information is available at: groups.io/g/human-phenotype-… @MonarchInit @pnrobins #freestandards #OpenScience
We have just made a new release of @hp_ontology and the associated resources. See announcement here: groups.io/g/human-phenotype-… Thanks to the whole community for the feedback and contributions! #openscience #openstandards #freestandards
5
1
12
Phenomizer retweeted
New HPO release for August 2020 now out. Thanks to whole community for the support! #openscience #openstandards #freestandards #obo
We have just made a new release of @hp_ontology and the associated resources. See announcement here: groups.io/g/human-phenotype-… Thanks to the whole community for the feedback and contributions! #openscience #openstandards #freestandards
7
5
Phenomizer retweeted
New March 2020 release aka the Epilepsome release. See groups.io/g/human-phenotype-… for more details. Thanks to @IngoHelbig @pnrobins @NicoMatentzoglu @N_Vasilevsky @drseb_ et al. Stay safe wherever you are!
9
11
New HPO release now out. We call it the #RareDiseaseDay -release. See the announcement on @hp_ontology mailinglist: groups.io/g/human-phenotype-… We hope you like it
6
17
They write on @phenomizer : „For example, he and his colleagues use the "Phenomizer" regularly. The Phenomizer has often helped them to find a diagnosis in complex situations, said Schäfer. "The tool should be part of the "standard programme" in every rare disease centre...“ 👍🏻
3
11
German article about the RD FOP. I got interviewed about tools like @phenomizer that use @hp_ontology . Rare disease day is coming soon! web.de/magazine/wissen/mensc…
2
6
Replying to @Tagesspiegel
@Tagesspiegel berichtet heute über das Potenzial digitaler Lösungen wie Ada im Bereich der Seltenen Erkrankungen. Übrigens: Der zitierte @drseb_ ist inzwischen bei @adahealth_de tätig.
2
5