@ucsdccbb

@UCSanDiego's Center for Computational Biology & Bioinformatics. Providing world-class bioinformatics expertise for genomic data and #PrecisionMedicine.

 San Diego, CA
compbio.ucsd.edu
Joined September 2015
  • Tweets131
  • Following727
  • Followers661
4Media
Excited to see our work out in Nature Protocols! We develop a tool to map the shared gene networks underlying related diseases. lnkd.in/ejnCTN9F
1
3
216
Check out our latest work studying comorbidity between autism and congenital heart disease. Great collaboration with @TreyIdeker @sbr28 @WillseyLab and Khokha lab authors.elsevier.com/c/1dbe9…
4
20
4
53
CCBB is looking to hire a junior Bioinformatics Analyst- please share widely! jobs.ucsd.edu/bulletin/job.a…
3
2
Lots of space bio research out of @NASA @CellPressNews today! Part of this effort, Sara Brin Rosenthal (@sbr28) & Kathleen Fisch (@kathleenfisch) @ucsdccbb used computational methods to spot differences between mice on @Space_Station and Earth-bound mice eurekalert.org/pub_releases/…
2
3
Identification of Lineage-specific Transcription Factors That Prevent Activation of Hepatic Stellate Cells and Promote Fibrosis Resolution. - PubMed - NCBI ncbi.nlm.nih.gov/pubmed/3198…
1
1
Read about CCBB's newest paper, "The C. elegans RIG-I homolog DRH-1 mediates the Intracellular Pathogen Response upon viral infection" @ ncbi.nlm.nih.gov/pubmed/3161…
1
The #PCMIsymposium has concluded! Thank you to all of our speakers for sharing your work & joining us in an effort to build a community of interdisciplinary researchers that drive the field of psychiatric disorder research forward! See more pictures here: qbi.ucsf.edu/pcmisymposium – at San Francisco, CA
3
6
That feeling when your authentication code is about to expire but you go for it anyway
1
2
The NDEx2 #Python client v3.3.0 is out! Install now via PIP. Docs here: bit.ly/2lSdWki @CancerCellMap @cytoscape #nciitcr @CIViCdb #networkbiology @WikiPathways @ucsdccbb
2
4
A new build of the cyNDEx-2 @cytoscape app (v2.3.1) has been released! Download the latest version now or update directly via the Cytoscape App Manager. #nciitcr #networkbiology @WikiPathways @ucsdccbb @CancerCellMap @CIViCdb
5
8
#PLOSCompBio: Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks dx.plos.org/10.1371/journal.…
4
4
Hey I won a poster prize!! 😱 thanks @xanderpico and the #NetBio organizers!! #ISMBECCB2019 #ISMBECCB
1
3
24
STILL DON'T KNOW how to plan your #SingleCell transcriptome experiment? READ HERE OUR TUTORIAL: Guidelines for the experimental design of single-cell RNA sequencing studies @NatureProtocols. nature.com/articles/s41596-0…
4
206
7
469
CCBB has a new paper out :-) Read more about Focal Adhesion Kinase (FAK) Regulation of Programmed Death-1 (PD-1)/Programmed Death Ligand-1 (PD-L1) checkpoint signaling in a mouse model of epithelial ovarian cancer sciencedirect.com/science/ar…
1
1
NEW! 2 collections with over 500 curated human pathway diagrams from @WikiPathways now available in @NDExProject: bit.ly/2K0FJJm Thanks to @xanderpico and @ariutta for making this resource available @cytoscape @CancerCellMap #nciitcr #networkbiology #compbio @ucsdccbb
6
14
Activated Hepatic Stellate Cells and Portal Fibroblasts contribute to cholestatic liver fibrosis in MDR2 knockout mice doi.org/10.1016/j.jhep.2019.…
1
1
Hear Pancreatic Cancer Stem Cells ROR sciencedirect.com/science/ar…
1
1
2
integrative investigation into causes and treatments for pancreatic cancer using #crispr technologies and #network analysis 'A Multiscale Map of the Stem Cell State in Pancreatic Adenocarcinoma' sciencedirect.com/science/ar…
1
1
#Check out CCBB's 2 new papers in Cancer (@AmericanCancer) & Epigenetics (@tandfonline)! onlinelibrary.wiley.com/doi/… and tandfonline.com/doi/abs/10.1… #science #Parkinsons #UCSD
1
1
Load more