Biochemist | Düsseldorf | PhD Student @WeberLab_HHU @ceplas_1
Nordrhein-Westfalen, Deutschland
Joined July 2016
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Sebastian Triesch retweeted
Single-nuclei sequencing of Moricandia arvensis reveals bundle sheath cell function in the photorespiratory shuttle of C3-C4 ... biorxiv.org/cgi/content/shor… #biorxiv_plants
Sebastian Triesch retweeted
🚀 Exciting new research alert! Check out "Predmoter - Cross-species prediction of plant promoter and enhancer regions" 🌿. This deep learning tool predicts ATAC-seq and ChIP-seq read coverage from DNA sequences, reducing cost and time in plant genomics! Read more: doi.org/10.1093/bioadv/vbae0… 📘 #Bioinformatics #PlantScience #Genomics #AI @SebTriesch @SchluterUrte
Sebastian Triesch retweeted
Peer-reviewed version finally out: Predmoter—cross-species prediction of plant promoter and enhancer regions academic.oup.com/bioinformat…
Sebastian Triesch retweeted
A week left to apply! 🚨 I’m looking for a research technician to join us @OxfordBiology and to help set up an efficient transformation pipeline in the C4 species Gynandropsis. Come work with us on leaf anatomy and photosynthesis! 🌱🪴 Find out more 👇 my.corehr.com/pls/uoxrecruit…
Sebastian Triesch retweeted
Our paper on the dissection of three light-responsive plant enhancers is out: academic.oup.com/plcell/adva…
My favorite finding: the enhancers rely on suboptimal transcription factor binding sites. This is consistent with the beautiful work on animal enhancers from @EKFarley
Sebastian Triesch retweeted
Great work @Pabster212! Investigating the cis-Regulatory Basis of C3 and C4 Photosynthesis in Grasses at Single-Cell Resolution biorxiv.org/content/10.1101/…
Sebastian Triesch retweeted
Transposable elements contribute to the establishment of the glycine shuttle in Brassicaceae species - Triesch - Plant Biology - Wiley Online Library onlinelibrary.wiley.com/doi/… @SebTriesch @JBouvierPlants @Steve__Kelly @AlisandraDenton @SchluterUrte @vReichel_Deland
Sebastian Triesch retweeted
'Brassicaceae display variation in efficiency of photorespiratory carbon-recapturing mechanisms' - Urte Schlüter, Jacques W Bouvier, Ricardo Guerreiro, Milena Malisic, Carina Kontny, Philipp Westhoff, Benjamin Stich, @apmweber 🌿
bit.ly/3rc8pXK
ALT CO2 compensation points in selected Brassicaceae. CO2 compensation points were measured in young, fully expanded leaves of greenhouse-grown plants. The letters above each box indicate the statistical grouping determined by ANOVA followed by HSD post-hoc test with α=0.05. The tested taxa are coloured according to photosynthesis type as C3 (grey), C3–C4 (blue), and C4 (red). Plant names have been abbreviated for legibility and are provided in full in the Materials and methods.
Sebastian Triesch retweeted
I’m happy to share “Cooperativity and additivity in plant enhancers”, our newest paper out now on bioRxiv: biorxiv.org/content/10.1101/…
We dissected three light-responsive plant enhancers and found evidence for cooperative and additive interactions between functional enhancer regions.
Sebastian Triesch retweeted
When you work on a bunch of weird non-model species this kind of prediction is everything! Predmoter - Cross-species prediction of plant promoter and enhancer regions biorxiv.org/content/10.1101/…
Sebastian Triesch retweeted
#Predmoter deep neural network. input: genome sequence FASTA; output: prediction of ATAC- and Histone H3 trimethylated at lysine 4 (H3K4me3) ChIP-seq. Documentation/ download from: github.com/weberlab-hhu/Pred…
@AlisandraDenton @SebTriesch @WeberLab_HHU @SchluterUrte @vReichel_Deland
Predmoter - Cross-species prediction of plant promoter and enhancer regions biorxiv.org/cgi/content/shor… #bioRxiv
Sebastian Triesch retweeted
Predmoter - Cross-species prediction of plant promoter and enhancer regions biorxiv.org/content/10.1101/…
Sebastian Triesch retweeted
The identification of CREs with Predmoter with only DNA sequence as input! 🤓
Predmoter - Cross-species prediction of plant promoter and enhancer regions biorxiv.org/content/10.1101/…
Sebastian Triesch retweeted
Eager to delve into the role of metabolites in microbial communities? Join our team in the CRC 1535 as a PostDoc in the Metabolomics and Metabolism Laboratory! Let your expertise impact our research sfb1535.hhu.de/open-position…
#PostDoc #Metabolomics #MicrobialCommunities
Sebastian Triesch retweeted
A transcription factor module mediating C2 photosynthesis biorxiv.org/cgi/content/shor… #biorxiv_plants
Sebastian Triesch retweeted
♻️ Grüne Helden: Pflanzen als #CO2-Speicher im Kampf gegen den #Klimawandel!
Das Treibhausgas ist der Hauptverursacher des anthropogenen Klimawandels. Wie können Pflanzen CO2 aus der Atmosphäre entfernen? 1/3 – at Düsseldorf, Germany
ALT Fotomontage des Haus der Universität auf das ein Weg zwischen zwei Maisfeldern zuläuft.
Sebastian Triesch retweeted
Just out in @PlantCellEnvir: Genome assemblies and annotations of 19 closely related Brassiceae taxa with different photosynthesis characteristics (C3 and C3-C4) @SebTriesch @SchluterUrte onlinelibrary.wiley.com/doi/…
Sebastian Triesch retweeted
📢#JobOffer
Are you interested in plant gene regulation and about to finish your PhD? I have an open #postdoc position in my new #EmmyNoether group at @HHU_de. Reach out for more information or to apply.
Please RT. Looking for a #PhDposition instead? Check my previous Tweet.
Sebastian Triesch retweeted
📢#JobOffer
Are you interested in plant gene regulation and how to engineer it? Don’t hesitate to apply for a #PhD position in my new #EmmyNoether group at @HHU_de.
Please RT. Thanks!
Looking for a #postdoc position instead? Check my next Tweet.
Sebastian Triesch retweeted
A genomic panel for studying C3-C4 intermediate photosynthesis in the Brassiceae tribe biorxiv.org/cgi/content/shor… #biorxiv_genomic