Nick Sisneros (@SisnerosNick) header
Nick Sisneros (@SisnerosNick) profile picture
Denver, CO
Joined July 2013
Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)Photo by Nick Sisneros (@SisnerosNick)
The Arizona Genomics Institute is hiring! We are looking for a new colleague to join the wet lab operations: basic molecular biology skills are necessary, familiarity with DNA and RNA extraction and handling are a plus. More details and application here: arizona.csod.com/ux/ats/care…
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Replying to @nanopore
@nanopore Dorado/Herro error corrected simplex 🍌reads yield near T2T reference phased genomes @keygene with 16/22 T2T contigs in first trials in contrast to 2/22 T2T for HiFi-based assembly using ~30X coverage. @msikic Impressive! More to come.
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Did you have FOMO because you missed @NanoporeConf like me? Join us @FGCZ_EN in Unlocking Genomic Insights: Sequencing with Nanopore. Hear about Analysis of Epigenetic Changes, Human Whole Genome Sequencing, and Genome Assembly. Register here: fgcz.ch/news-and-events/semi…
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#nanoporecomf Tetraploid coffee genome assembled with just one flow cell! #T2T
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Come and see my @nanopore talk -Unlocking the banana pangrnome- at the secret cinema coming Wednesday #nanoporeconf or watch it online. #diversiry #pangenome
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Herro error corrected @keygene banana 🍌 @nanopore simplex reads versus duplex and HiFi data. Amazing work by @msikic and team. See you next week in London! #nanoporeconf #accuracy #pangenome #banana
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Nick Sisneros retweeted
See you next week at London Calling 2024!! I will present Herro error correction github.com/lbcb-sci/herro. This photo is now 9 years old. W/ @IvanSovic and @bioinfoHR #nanopore #nanoporeconf
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Nick Sisneros retweeted
Hifiasm is able to combine HiFi and ultra-long reads for high-quality assembly. It often assembles multiple human chromosomes in T2T and has been deployed by HPRC and other groups. If you wonder how that works in detail, see Haoyu's recent paper at rdcu.be/dHxG3
By effective and efficient integration of PacBio HiFi, ONT ultra-long and other sequencing data types, hifiasm (UL) enables telomere-to-telomere diploid and polyploid genome assembly at population-scale. @ChengChhy @lh3lh3 nature.com/articles/s41592-0…
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Nick Sisneros retweeted
💥BREAKING💥 Possibly the FIRST BrownBean One MILLION bp 🧬 HIGH DUPLEX read 🧬 In West-Brabant ! Thank you @LongReadMaster ! Thank you @nanopore ! Thank you @LongRangeGenes !
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Nick Sisneros retweeted
So cool to see our P2 solo working full capacity. And love that colourful P2 skin ✨ Thank you @nanopore
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Now that’s what I call a packed house! Thank you #ESCMID community and our fantastic speakers for an exciting symposium on @nanopore sequencing applied to long-read 16S, tuberculosis drug resistance, nanopore-only bacterial genome wgMLST, and the future of metagenomics
It begins #ESCMID2024! Swing by booth C3 to meet the @nanopore team & discuss infectious disease applications including: 🧫 Microbial isolate whole genome sequencing 🦠 Full-length 16S microbial identification 🤧 Influenza WGS 🧬 Pathogen-agnostic metagenomics #ESCMIDGlobal
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Starting soon at 4:00 PM in Hall L - @nanopore Sundown Symposium! #ESCMID2024
It begins #ESCMID2024! Swing by booth C3 to meet the @nanopore team & discuss infectious disease applications including: 🧫 Microbial isolate whole genome sequencing 🦠 Full-length 16S microbial identification 🤧 Influenza WGS 🧬 Pathogen-agnostic metagenomics #ESCMIDGlobal
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Replying to @sergekoren
@sergekoren showing @nanopore duplex accuracy generated by @KeyGeneInfo reaching 99.9% identity for 🍅, on par with HiFi but with significant longer read lengths. #AGBTAg #agbtag23 #T2T
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Just 4 weeks to ⁦@nanopore⁩ London calling conference. Looking forward to provide an update on our 🍌 pangenome construction in the mini theater.#nanoporeconf #T2T #duplex
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Nick Sisneros retweeted
Ready for >Q30 ONT reads? Herro error correction now supports both R9.4.1 and R10.4.1. simplex reads w/ @domstanojevic @DehuiLin (CHM13 -R9.4.1) #nanopore #longreads
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Exciting webinar coming up - Advancements in @nanopore Sequencing for Enhanced Food Safety and Quality Assurance Food microbiologists will share how new genomic tools can help create a safer and more digital, traceable food system May 16, 11:00 AM ET event.on24.com/wcc/r/4562723…
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Nick Sisneros retweeted
Replying to @sergekoren
@sergekoren presenting collaboration with @AW_NGS on AW🍅 T2T using @nanopore! #AGBTAg #AGBTAg23 Look at those beautiful long reads over 20kb!
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Awesome to see @nanopore being deployed to uncover novel biology by such a prestigious team of scientists. Equally jaw dropping is that this publication was produced using MinION - our most accessible sequencer that's celebrating 10 years of democratising sequencing!
🤯"Jaw-dropping" finding in @ScienceMagazine today shows certain chromosomes have telomere lengths that are consistently longer or shorter than others, shocking even @NobelPrize winner & telomere expert Carol Greider. Telomere length plays a role in longevity & cancer. 🧵⬇️
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Great to meet up with @ivanliachko yesterday in real life! This is NOT AI generated! #Boston
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Nick Sisneros retweeted
Attending #AACR24? Grab a coffee and join us for today's Data for breakfast session. Join us for a summary session covering basics of nanopore data analysis and cancer bioinformatics tools and workflows for genomic, epigenomic and transcriptomics analysis. #AACR
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